Structure of PDB 8k24 Chain m

Receptor sequence

>8k24m (length=302) Species: 979527 (Vibrio phage ICP1_2004_A) [Search protein sequence]

TKLKAPAVLAYSRKINPTNALMFAVNWSDRDNTTAVMVGTKTVAGTQSVR
GNPNDADKGNIQTVNFANLPHNKNTLLVKYNVKFVGDVFKAELGGGEYSN
TLQTALENTDFGTLAYRYVYNIAAGRTLWRNRVGAESIETVITVNDQTFT
FSDLLVNEFDEDVDVAEIADMVAGVLSGEGFVTLKVEHYMLLGEGSEVFP
SQEFVENSKLSKQLFDLNGQAAMHDQKIGNAIRTIDTWYEDATTPIAVEP
YGSVVRNGVAYRAGNKTDLFTLMDGAVNGKSLTEEDQMFVTANLIRGGVF
GG

3D structure

PDB

8k24 Structure of csy complex with long DNA State2

Chain

Resolution

3.72 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	m	A11 Y12 R14 V44 A45 Q63 E93 L94 W130 R131 S202 Q203 E204 F205 H225 Q227 K228 N231 R234 R257 G298 G299	A10 Y11 R13 V43 A44 Q62 E92 L93 W129 R130 S201 Q202 E203 F204 H224 Q226 K227 N230 R233 R256 G297 G298
BS02	dna	m	A8 V9 Q48 V50 N61 I62 Q63 F205 E207 S212 V300	A7 V8 Q47 V49 N60 I61 Q62 F204 E206 S211 V299

External links

PDB	RCSB:8k24, PDBe:8k24, PDBj:8k24
PDBsum	8k24
PubMed
UniProt	F1D5V6

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