Structure of PDB 8cre Chain m

Receptor sequence

>8crem (length=296) Species: 5476 (Candida albicans) [Search protein sequence]

MQKEFRTSAYHSRFQTPFRRRQEGKTDYYQRKRLVTQHKAKYNSPKYRLV
VRFTNKDIIAQIVSAHITGDVVFTAAYAHELPRYGIKYGLTNWSAAYAVG
LLVARRALQKLGLDETYTGVEEVEGEFELTEAVEDGPRPFKVFLDIGLQR
TTTGARVFGVLKGASDGGLYVPHSPNRFPGWDIEAEELDAELLRKYIFGG
HVAEYMEELLDDDEEKYKSIFKNYIEEEIESEDVEEIYANAHEAIRADPS
FKPTEKKFTKEQYKAESKKYRQQKLTRAERQAKVAKKIAEFKAQQE

3D structure

PDB

8cre Drug-induced rotational movement of the ribosome is a key factor for read-through enhancement

Chain

Resolution

3.0 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	m	M3 Q4 K5 E6 F7 R8 Y12 R15 F16 Q17 R23 G26 T28 Y31 R35 L36 K43 Y44 K48 Y49 L113 P139 R140 P141 F142 K143 F145 L146 I148 L150 T153 P174 H175 S176 N178 R179	M1 Q2 K3 E4 F5 R6 Y10 R13 F14 Q15 R21 G24 T26 Y29 R33 L34 K41 Y42 K46 Y47 L111 P137 R138 P139 F140 K141 F143 L144 I146 L148 T151 P172 H173 S174 N176 R177
BS02	rna	m	R8 S10 H13 S14 F16 T18 F20 R21 R22 Q24 T28 Y30 R33 R50 V52 R54 T56 N57 Q63 I69 T70 G71 D72 V73 V74 Y79 G91 N94 R152 T154 T155 G156 A157 R158 Y198 H203 Y207 K218 S221 I222 N225 F253 P255 T256 F260 K262 Y265 K266 E268 S269 K270 Y272 Q274 K276 L277 R282 K285 K289	R6 S8 H11 S12 F14 T16 F18 R19 R20 Q22 T26 Y28 R31 R48 V50 R52 T54 N55 Q61 I67 T68 G69 D70 V71 V72 Y77 G89 N92 R150 T152 T153 G154 A155 R156 Y196 H201 Y205 K216 S219 I220 N223 F251 P253 T254 F258 K260 Y263 K264 E266 S267 K268 Y270 Q272 K274 L275 R280 K283 K287

External links

PDB	RCSB:8cre, PDBe:8cre, PDBj:8cre
PDBsum	8cre
PubMed
UniProt	G1UAA6

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