Structure of PDB 7ums Chain m

Receptor sequence
>7umsm (length=275) Species: 10912 (Rotavirus) [Search protein sequence]
NYGLNIPITGSMDTVYSNSTREEVFLTSTLCLYYPTEASTQISDGEWKDS
LSQMFLIKGWPTGSVYFKEYSNIVDFSVDPQLYCDYNLVLMKYDQSLELD
MSELADLILNEWLCNPMDITLYYYQQSGESNKWISMGSSCTVKVCPLNTQ
TLGIGCQTTNVDSFETVAENEKLAIVDVVDGINHKINLTTTTCTIRNCKK
LGPRENVAVIQVGGANILDITADPTTNPQIERMMRVNWKRWWQVFYTIVD
YINQIVQVMSKRSRSLNSAAFYYRV
3D structure
PDB7ums Rotavirus VP4 Epitope of a Broadly Neutralizing Human Antibody Defined by Its Structure Bound with an Attenuated-Strain Virion.
Chainm
Resolution3.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA m D151 E154 E222 L224 D100 E103 E171 L173
BS02 CA m D270 T272 D274 T277 D219 T221 D223 T226
BS03 CA m Q177 D228 D231 Q126 D177 D180
BS04 CA m G206 S214 E216 G155 S163 E165
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
Cellular Component
GO:0016020 membrane
GO:0019028 viral capsid
GO:0039621 T=13 icosahedral viral capsid
GO:0039624 viral outer capsid
GO:0044165 host cell endoplasmic reticulum
GO:0044166 host cell endoplasmic reticulum lumen

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Molecular Function
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Cellular Component
External links
PDB RCSB:7ums, PDBe:7ums, PDBj:7ums
PDBsum7ums
PubMed35924923
UniProtB1NP55

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