Structure of PDB 8wmv Chain l

Receptor sequence

>8wmvl (length=175) Species: 52970 (Rhodomonas salina) [Search protein sequence]

DNAMPFLERPPKLDGSLAGDVGFDPVGFSNYFDLRWLRESELKHGRVCML
GVTGLLVQEAVCLPQFSNGKTPVDDFFVVPAAGLWQVFFAIGAVEFFSHG
FKLTPGDMFSEGREAGDFGFDPLGCGKNPDALARRRLVEVKNGRLAMIAF
GGLLHQQLLTGQGTFEQLANFKAIA

3D structure

PDB

8wmv Growth phase-dependent reorganization of cryptophyte photosystem I antennae.

Chain

Resolution

2.94 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	CLA	l	A209 I210	A173 I174
BS02	WVN	l	F112 F124	F76 F88
BS03	CLA	l	A39 M40 P41 F42 F59	A3 M4 P5 F6 F23
BS04	CLA	l	L49 V57 F59 D60 F64 L70 L73 R74 E77 H80 R180 M183 I184	L13 V21 F23 D24 F28 L34 L37 R38 E41 H44 R144 M147 I148
BS05	CLA	l	F68 L73 H80	F32 L37 H44
BS06	CLA	l	L86 G90 Q94 L99 F102 D111 F112 V115	L50 G54 Q58 L63 F66 D75 F76 V79
BS07	CLA	l	P116 A118 G119 Q122 A126	P80 A82 G83 Q86 A90
BS08	CLA	l	W72 E75 S76 K79 H80 F124 I127 G128 E131 L139	W36 E39 S40 K43 H44 F88 I91 G92 E95 L103
BS09	CLA	l	R82 G152 D153 F154 F156 D157 C161 R172 E175	R46 G116 D117 F118 F120 D121 C125 R136 E139
BS10	CLA	l	V174 K177 L181	V138 K141 L145
BS11	KC2	l	R170 R171 V174 N178 L181	R134 R135 V138 N142 L145
BS12	CLA	l	I184 G188 H191 Q192 L195	I148 G152 H155 Q156 L159
BS13	II0	l	M85 F156 D157 N178 L181 A185 L189 Q192	M49 F120 D121 N142 L145 A149 L153 Q156
BS14	II0	l	F59 D60 P61 V62 H80 V83 C84 P108 F112 M183 F186	F23 D24 P25 V26 H44 V47 C48 P72 F76 M147 F150
BS15	II0	l	R180 L181 I184	R144 L145 I148
BS16	II0	l	K79 V83 Q101 V123 I127 E131 F154	K43 V47 Q65 V87 I91 E95 F118

External links

PDB	RCSB:8wmv, PDBe:8wmv, PDBj:8wmv
PDBsum	8wmv
PubMed	38734819

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