Structure of PDB 8olc Chain l

Receptor sequence

>8olcl (length=276) Species: 10912 (Rotavirus) [Search protein sequence]

QNYGINLPITGSMDTAYANSTQEETFLTSTLCLYYPTEAATEINDNSWKD
TLSQLFLTKGWPTGSVYFKEYTNIASFSVDPQLYCDYNVVLMKYDATLQL
DMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGSSCTIKVCPLNT
QTLGIGCLTTDATTFEEVATAEKLVITDVVDGVNHKLDVTTATCTIRNCK
KLGPRENVAVIQVGGSDILDITADPTTAPQTERMMRINWKKWWQVFYTVV
DYVDQIIQVMSKRSRSLNSAAFYYRV

3D structure

PDB

8olc Structural basis of rotavirus spike proteolytic activation

Chain

Resolution

3.48 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	CA	l	G206 T214 E216	G156 T164 E166
BS02	CA	l	Q177 D228 V229 D231	Q127 D178 V179 D181

External links

PDB	RCSB:8olc, PDBe:8olc, PDBj:8olc
PDBsum	8olc
PubMed
UniProt	A0A060IEQ1

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