Structure of PDB 7pjs Chain l

Receptor sequence

>7pjsl (length=123) Species: 562 (Escherichia coli) [Search protein sequence]

ATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKKPNSALRK
VCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGA
LDCSGVKDRKQARSKYGVKRPKA

3D structure

PDB

7pjs Structural mechanism of GTPase-powered ribosome-tRNA movement

Chain

Resolution

2.35 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	l	A1 N4 Q5 L6 R8 R11 A12 R13 K14 K17 V20 A25 C26 P27 Q28 K29 R30 K42 K43 N45 S46 A47 L48 R49 K50 T57 Y65 G67 G68 E69 L80 R82 G83 R85 V86 K87 D88 P90 R93 R109 K110 Q111 A112 R113 S114 K115 V118 K119 R120	A1 N4 Q5 L6 R8 R11 A12 R13 K14 K17 V20 A25 C26 P27 Q28 K29 R30 K42 K43 N45 S46 A47 L48 R49 K50 T57 Y65 G67 G68 E69 L80 R82 G83 R85 V86 K87 D88 P90 R93 R109 K110 Q111 A112 R113 S114 K115 V118 K119 R120
BS02	MG	l	P44 N45	P44 N45

Gene Ontology

	Molecular Function
GO:0000049	tRNA binding
GO:0003735	structural constituent of ribosome
GO:0019843	rRNA binding

	Biological Process
GO:0000028	ribosomal small subunit assembly
GO:0006412	translation

	Cellular Component
GO:0005840	ribosome
GO:0015935	small ribosomal subunit
GO:0022627	cytosolic small ribosomal subunit
GO:1990904	ribonucleoprotein complex

External links