Structure of PDB 7pi9 Chain l

Receptor sequence
>7pi9l (length=136) Species: 272634 (Mycoplasmoides pneumoniae M129) [Search protein sequence]
MLQPKRTKYRKPHNVSYEGKAKGNSYVAFGEYGLVATKGNWIDARAIESA
RIAISKCLGKTGKMWIRIFPHMSKTKKPLEVRMGSGKGNPEFWVAVVKQG
TVMFEVANIPESQMIKALTRAGHKLPVTWKILKREE
3D structure
PDB7pi9 Visualizing translation dynamics at atomic detail inside a bacterial cell.
Chainl
Resolution6.3 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 rna l P4 K5 R6 K8 Y9 K11 H13 N14 K22 G23 N24 Y26 W41 R45 S49 W65 H71 K76 K77 R82 M83 G84 S85 G86 K87 G88 R120 H123 K124 P126 T128 P4 K5 R6 K8 Y9 K11 H13 N14 K22 G23 N24 Y26 W41 R45 S49 W65 H71 K76 K77 R82 M83 G84 S85 G86 K87 G88 R120 H123 K124 P126 T128
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:7pi9, PDBe:7pi9, PDBj:7pi9
PDBsum7pi9
PubMed36171285
UniProtP41204|RL16_MYCPN Large ribosomal subunit protein uL16 (Gene Name=rplP)

[Back to BioLiP]