Structure of PDB 8wmj Chain k

Receptor sequence
>8wmjk (length=180) Species: 52970 (Rhodomonas salina) [Search protein sequence]
RAVPFAPAPDCLPENIPGYMGFDPLGLSTLCNVEWLREAEIKHCRVAMLA
AAGSIAQDLYQFPGVEKIVGSAKMTGVHDKILAAASTGDYKAQAMSQILF
WTSFLEIVTLPAVFETMNGGPRKPGVFFFDPLGLGKGDKMGEMELKEIKN
GRLAMIGVGGMVHHYLLTGKGPIQFLSGIP
3D structure
PDB8wmj Growth phase-dependent reorganization of cryptophyte photosystem I antennae.
Chaink
Resolution3.0 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 CLA k A48 V49 P50 F51 M66 F68 A2 V3 P4 F5 M20 F22
BS02 CLA k L58 I62 G64 M66 F68 D69 L73 R83 E86 H89 R198 M201 L12 I16 G18 M20 F22 D23 L27 R37 E40 H43 R152 M155
BS03 CLA k W81 L82 H89 W35 L36 H43
BS04 CLA k L95 A96 G99 A102 Q103 Y106 Q107 F108 V123 M141 L49 A50 G53 A56 Q57 Y60 Q61 F62 V77 M95
BS05 CLA k F108 P109 G110 V111 K113 K137 F62 P63 G64 V65 K67 K91
BS06 CLA k Y136 Q143 W147 Y90 Q97 W101
BS07 CLA k H124 L128 M141 S142 I144 L145 H78 L82 M95 S96 I98 L99
BS08 CLA k W81 A85 K88 H89 S149 E152 L156 W35 A39 K42 H43 S103 E106 L110
BS09 CLA k R91 M94 L95 F173 F174 F175 D176 L180 G181 M186 M189 E190 E193 R45 M48 L49 F127 F128 F129 D130 L134 G135 M140 M143 E144 E147
BS10 CLA k K192 K195 K146 K149
BS11 KC2 k K192 N196 K146 N150
BS12 KC2 k I202 G206 H209 H210 F221 I225 P226 I156 G160 H163 H164 F175 I179 P180
BS13 KC2 k I225 P226 I179 P180
BS14 CLA k H209 L212 L213 H163 L166 L167
BS15 II0 k M94 F175 D176 L178 L199 M207 H210 P218 F221 L222 M48 F129 D130 L132 L153 M161 H164 P172 F175 L176
BS16 II0 k F68 D69 P70 L71 H89 V92 A93 A96 Q103 M120 M201 F22 D23 P24 L25 H43 V46 A47 A50 Q57 M74 M155
BS17 II0 k M66 K195 R198 L199 I202 L213 M20 K149 R152 L153 I156 L167
BS18 IHT k F68 T121 H124 D125 G205 V208 F22 T75 H78 D79 G159 V162
BS19 II0 k R91 V92 L95 I144 T148 R45 V46 L49 I98 T102
BS20 CLA k F173 F175 F127 F129
BS21 II0 k Y136 Q139 Q143 F146 W147 Y90 Q93 Q97 F100 W101
BS22 IHT k W147 F150 W101 F104
External links