Structure of PDB 8q4f Chain k

Receptor sequence

>8q4fk (length=144) Species: 562 (Escherichia coli) [Search protein sequence]

MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGGGVRRGF
EGGQMPLYRRLPKFGFTSRKAAITAEIRLSDLAKVEGGVVDLNTLKAANI
IGIQIEFAKVILAGEVTTPVTVRGLRVTKGARAAIEAAGGKIEE

3D structure

PDB

8q4f Structure of arbekacin bound Escherichia coli 70S ribosome

Chain

Resolution

3.1 Å

3D
structure

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	k	N4 S7 E10 G11 K13 K14 G16 K17 R18 L19 G20 R21 G22 I23 G24 K29 T30 G32 R33 G34 H35 K36 Q38 K39 R41 S42 G43 R48 F50 E51 G52 G53 Q54 M55 Y58 R59 R60 P62 K63 F64 G65 F66 S68 R69 K70 E76 R78 N99 I103 Q104 K109 I111 L112 T128	N4 S7 E10 G11 K13 K14 G16 K17 R18 L19 G20 R21 G22 I23 G24 K29 T30 G32 R33 G34 H35 K36 Q38 K39 R41 S42 G43 R48 F50 E51 G52 G53 Q54 M55 Y58 R59 R60 P62 K63 F64 G65 F66 S68 R69 K70 E76 R78 N99 I103 Q104 K109 I111 L112 T128

External links

PDB	RCSB:8q4f, PDBe:8q4f, PDBj:8q4f
PDBsum	8q4f
PubMed
UniProt	P02413\|RL15_ECOLI Large ribosomal subunit protein uL15 (Gene Name=rplO)