Structure of PDB 8fzd Chain k

Receptor sequence
>8fzdk (length=117) Species: 562 (Escherichia coli) [Search protein sequence]
RKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFA
AQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITD
VTPIPHDGCRPPKKRRV
3D structure
PDB8fzd The ribosome termination complex remodels release factor RF3 and ejects GDP.
Chaink
Resolution3.1 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna k N28 N29 G39 A41 W44 T46 R53 K57 K87 P115 I116 H118 X119 C121 R122 K125 R127 R128 N16 N17 G27 A29 W32 T34 R41 K45 K75 P103 I104 H106 X107 C109 R110 K113 R115 R116
Gene Ontology
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8fzd, PDBe:8fzd, PDBj:8fzd
PDBsum8fzd
PubMed39030416
UniProtA0A0H3PWX2

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