Structure of PDB 7qv2 Chain k

Receptor sequence

>7qv2k (length=114) Species: 224308 (Bacillus subtilis subsp. subtilis str. 168)

IESGIAHIRSTFNNTIVTITDTHGNAISWSSAGALGFRGSRKSTPFAAQM
AAETAAKGSIEHGLKTLEVTVKGPGSGREAAIRALQAAGLEVTAIRDVTP
VPHNGCRPPKRRRV

3D structure

• PDB: 7qv2 Bacterial ribosome collision sensing by a MutS DNA repair ATPase paralogue.
• Chain: k
• Resolution: 3.5 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	k	H24 R26 N30 N31 T35 G41 N42 A43 W46 S48 A51 R55 K59 K89 P117 H120 N121 G122 C123 R124 P126 K127 R129 R130 V131	H7 R9 N13 N14 T18 G24 N25 A26 W29 S31 A34 R38 K42 K72 P100 H103 N104 G105 C106 R107 P109 K110 R112 R113 V114

Gene Ontology

Molecular Function

• GO:0003735 structural constituent of ribosome
• GO:0005515 protein binding
• GO:0019843 rRNA binding

Biological Process

• GO:0006412 translation

Cellular Component

• GO:0005840 ribosome
• GO:0022627 cytosolic small ribosomal subunit
• GO:1990904 ribonucleoprotein complex

External links

• PDB: RCSB:7qv2, PDBe:7qv2, PDBj:7qv2
• PDBsum: 7qv2
• PubMed: 35264791
• UniProt: P04969|RS11_BACSU Small ribosomal subunit protein uS11 (Gene Name=rpsK)