Structure of PDB 7nsp Chain k

Receptor sequence
>7nspk (length=117) Species: 562 (Escherichia coli) [Search protein sequence]
RKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFA
AQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITD
VTPIPHNGCRPPKKRRV
3D structure
PDB7nsp Structural and mechanistic basis for translation inhibition by macrolide and ketolide antibiotics.
Chaink
Resolution3.5 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna k H22 N28 N29 T33 G39 N40 A41 W44 T46 G49 R53 G54 I116 P117 H118 N119 G120 R122 P124 K125 R127 R128 V129 H10 N16 N17 T21 G27 N28 A29 W32 T34 G37 R41 G42 I104 P105 H106 N107 G108 R110 P112 K113 R115 R116 V117
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7nsp, PDBe:7nsp, PDBj:7nsp
PDBsum7nsp
PubMed34294725
UniProtA0A5I5F5V9

[Back to BioLiP]