Structure of PDB 6wdg Chain k

Receptor sequence
>6wdgk (length=122) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRG
KVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIF
GPVTRELRSEKFMKIISLAPEV
3D structure
PDB6wdg Cryo-EM of elongating ribosome with EF-Tu•GTP elucidates tRNA proofreading.
Chaink
Resolution3.3 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna k N13 P48 K54 T97 R98 F100 R108 S117 N13 P48 K54 T97 R98 F100 R108 S117
BS02 rna k M1 Q3 E4 Q5 T6 M7 I22 K23 S28 R30 R31 Y32 K40 T42 G55 V57 K66 K67 R70 R78 M1 Q3 E4 Q5 T6 M7 I22 K23 S28 R30 R31 Y32 K40 T42 G55 V57 K66 K67 R70 R78
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6wdg, PDBe:6wdg, PDBj:6wdg
PDBsum6wdg
PubMed32612237
UniProtP0ADY3|RL14_ECOLI Large ribosomal subunit protein uL14 (Gene Name=rplN)

[Back to BioLiP]