Structure of PDB 6d90 Chain k

Receptor sequence
>6d90k (length=69) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]
PRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKE
KAEKLKQSLPPGLAVKELK
3D structure
PDB6d90 Dual tRNA mimicry in the Cricket Paralysis Virus IRES uncovers an unexpected similarity with the Hepatitis C Virus IRES.
Chaink
Resolution3.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna k P2 R3 K4 R17 D19 K26 K33 K35 R37 S39 Y41 L42 T44 L69 P1 R2 K3 R16 D18 K25 K32 K34 R36 S38 Y40 L41 T43 L68
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
GO:0022618 protein-RNA complex assembly
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6d90, PDBe:6d90, PDBj:6d90
PDBsum6d90
PubMed29856316
UniProtG1U001|RL38_RABIT Large ribosomal subunit protein eL38 (Gene Name=RPL38)

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