Structure of PDB 9fbv Chain j

Receptor sequence
>9fbvj (length=118) Species: 679895 (Escherichia coli BW25113) [Search protein sequence]
MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRG
KVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIF
GPVTEKFMKIISLAPEVL
3D structure
PDB9fbv Paenilamicins from the honey bee pathogen Paenibacillus larvae are context-specific translocation inhibitors of protein synthesis.
Chainj
Resolution2.4 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna j M1 Q3 Q5 T6 M7 I22 K23 L25 G26 G27 S28 H29 R30 R31 Y32 K40 T42 K44 K54 G55 V57 K66 K67 R70 G74 R78 N82 M1 Q3 Q5 T6 M7 I22 K23 L25 G26 G27 S28 H29 R30 R31 Y32 K40 T42 K44 K54 G55 V57 K66 K67 R70 G74 R78 N82
BS02 rna j P48 R49 R98 P48 R49 R98
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:9fbv, PDBe:9fbv, PDBj:9fbv
PDBsum9fbv
PubMed38826346
UniProtP0ADY3|RL14_ECOLI Large ribosomal subunit protein uL14 (Gene Name=rplN)

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