Structure of PDB 8wmj Chain j

Receptor sequence

>8wmjj (length=172) Species: 52970 (Rhodomonas salina)

MSESVPFLKKPEALDSSMAGYAGFDPLGLSSIADIKFLQESEIKHCRIAM
LAAAGSIAQDIFTFPGVSKVVGTAKMTGVHDVLVKQGAMGQILLWTSFLE
VFGTIALLETLDGKRAPGDFKFDPLGFSKNAETAKRYQLSEIKNGRLAML
ATGGMVHGYFITGKGPLELLTN

3D structure

• PDB: 8wmj Growth phase-dependent reorganization of cryptophyte photosystem I antennae.
• Chain: j
• Resolution: 3.0 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	CLA	j	H117 V121 M126 G127 I129 L130	H80 V84 M89 G90 I92 L93
BS02	II0	j	Q128 W132	Q91 W95
BS03	WVN	j	W132 F135	W95 F98
BS04	II0	j	R84 I85 I129 E137	R47 I48 I92 E100
BS05	CLA	j	S41 P43	S4 P6
BS06	CLA	j	L51 G57 A59 F61 D62 L66 L75 E79 H82 R183 M186 L187	L14 G20 A22 F24 D25 L29 L38 E42 H45 R146 M149 L150
BS07	CLA	j	F74 L75 S78 H82	F37 L38 S41 H45
BS08	CLA	j	L88 A89 G92 Q96 F99 T100 F101 V104 V116 L120 M126	L51 A52 G55 Q59 F62 T63 F64 V67 V79 L83 M89
BS09	CLA	j	F101 P102 G103 V104	F64 P65 G66 V67
BS10	CLA	j	G124 A125 Q128 W132	G87 A88 Q91 W95
BS11	CLA	j	F74 E77 S78 K81 H82 I85 S134 E137 L144	F37 E40 S41 K44 H45 I48 S97 E100 L107
BS12	CLA	j	R84 M87 D156 F157 K158 F159 D160 F164 S165 Y174 Q175 E178 N181	R47 M50 D119 F120 K121 F122 D123 F127 S128 Y137 Q138 E141 N144
BS13	CLA	j	R173 L176 S177 N181	R136 L139 S140 N144
BS14	KC2	j	R173 Y174 N181	R136 Y137 N144
BS15	CLA	j	L187 G190 G191	L150 G153 G154
BS16	CLA	j	H194 F197	H157 F160
BS17	II0	j	M87 F159 P161 L162 P203 L207	M50 F122 P124 L125 P166 L170
BS18	II0	j	F61 D62 P63 A86 A89 Q96 M113 M186	F24 D25 P26 A49 A52 Q59 M76 M149
BS19	II0	j	K180 L184 I198	K143 L147 I161
BS20	IHT	j	T114 H117 D118 G190 V193 H194	T77 H80 D81 G153 V156 H157

External links

• PDB: RCSB:8wmj, PDBe:8wmj, PDBj:8wmj
• PDBsum: 8wmj
• PubMed: 38734819