Structure of PDB 8wm6 Chain j

Receptor sequence

>8wm6j (length=172) Species: 52970 (Rhodomonas salina)

MSESVPFLKKPEALDSSMAGYAGFDPLGLSSIADIKFLQESEIKHCRIAM
LAAAGSIAQDIFTFPGVSKVVGTAKMTGVHDVLVKQGAMGQILLWTSFLE
VFGTIALLETLDGKRAPGDFKFDPLGFSKNAETAKRYQLSEIKNGRLAML
ATGGMVHGYFITGKGPLELLTN

3D structure

• PDB: 8wm6 Growth phase-dependent reorganization of cryptophyte photosystem I antennae.
• Chain: j
• Resolution: 2.7 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	II0	j	R183 L184 L187	R146 L147 L150
BS02	CLA	j	F139 F159	F102 F122
BS03	WVN	j	W132 F135	W95 F98
BS04	II0	j	R84 I85 I129 T133 E137	R47 I48 I92 T96 E100
BS05	CLA	j	E40 S41 V42 P43 F44 F61	E3 S4 V5 P6 F7 F24
BS06	CLA	j	L51 M55 G57 Y58 A59 F61 D62 L66 L75 E79 H82 R183 M186	L14 M18 G20 Y21 A22 F24 D25 L29 L38 E42 H45 R146 M149
BS07	CLA	j	F74 L75 H82	F37 L38 H45
BS08	CLA	j	L88 A89 G92 Q96 F99 T100 F101 V104 L120 M126 F159	L51 A52 G55 Q59 F62 T63 F64 V67 L83 M89 F122
BS09	CLA	j	F101 P102 G103 V104 V107	F64 P65 G66 V67 V70
BS10	CLA	j	Q123 A125 Q128 W132	Q86 A88 Q91 W95
BS11	CLA	j	H117 V121 M126 G127 I129	H80 V84 M89 G90 I92
BS12	CLA	j	F74 S78 K81 H82 I85 S134 E137 T141 L144	F37 S41 K44 H45 I48 S97 E100 T104 L107
BS13	CLA	j	R84 M87 F157 F159 F164 S165 Y174 Q175 E178	R47 M50 F120 F122 F127 S128 Y137 Q138 E141
BS14	CLA	j	L176 S177 K180 N181	L139 S140 K143 N144
BS15	KC2	j	Y174 S177 N181 L184	Y137 S140 N144 L147
BS16	CLA	j	L187 G191 H194	L150 G154 H157
BS17	CLA	j	H194 F197	H157 F160
BS18	II0	j	M87 F159 P161 L162 L184 A188 G191 M192 P203 L207	M50 F122 P124 L125 L147 A151 G154 M155 P166 L170
BS19	II0	j	F61 D62 P63 L64 H82 A89 Q96 M113 M186	F24 D25 P26 L27 H45 A52 Q59 M76 M149
BS20	IHT	j	T114 H117 D118 G190 V193 H194 F197	T77 H80 D81 G153 V156 H157 F160

External links

• PDB: RCSB:8wm6, PDBe:8wm6, PDBj:8wm6
• PDBsum: 8wm6
• PubMed: 38734819