Structure of PDB 8ppk Chain j

Receptor sequence
>8ppkj (length=174) Species: 1541205 (Bat Hp-betacoronavirus/Zhejiang2013) [Search protein sequence]
MCSKGYELNQKTHFSVELPWIQIGENPIKPWSVTPAEALNTVYAAIAEGK
AAFIPPFKGMHKYLPELCVFLVRNHGNPTRPFDLQELAVREGDVNYGRSG
ETVGAIVPLDGQEPYGTITIQLRRRGKNAGGVYAWTNTRDTVTDDLVHEP
IDLYTEDPKGKHAQGNLRKFLTGG
3D structure
PDB8ppk Universal features of Nsp1-mediated translational shutdown by coronaviruses.
Chainj
Resolution2.98 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.1.1.57: methyltransferase cap1.
3.4.19.12: ubiquitinyl hydrolase 1.
3.6.4.12: DNA helicase.
3.6.4.13: RNA helicase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna j M1 K4 E7 K11 N74 H75 P78 R80 R98 S99 G100 R123 K127 W135 R139 L153 K159 K161 H162 Q164 N166 M1 K4 E7 K11 N74 H75 P78 R80 R98 S99 G100 R123 K127 W135 R139 L153 K159 K161 H162 Q164 N166
External links