Structure of PDB 7b0y Chain j

Receptor sequence
>7b0yj (length=86) Species: 9606 (Homo sapiens) [Search protein sequence]
SSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKN
SKQAEREEKRVLGLVLLRGENLVSMTVEGPPPKDTG
3D structure
PDB7b0y Structure of a transcribing RNA polymerase II-U1 snRNP complex.
Chainj
Resolution3.6 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna j Q22 K36 H37 N39 P53 K54 S56 R73 E75 Q17 K31 H32 N34 P48 K49 S51 R68 E70
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0071208 histone pre-mRNA DCP binding
GO:1990446 U1 snRNP binding
GO:1990447 U2 snRNP binding
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005685 U1 snRNP
GO:0005686 U2 snRNP
GO:0005737 cytoplasm
GO:0071204 histone pre-mRNA 3'end processing complex
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:7b0y, PDBe:7b0y, PDBj:7b0y
PDBsum7b0y
PubMed33446560
UniProtQ66K91

[Back to BioLiP]