Structure of PDB 6mtd Chain j

Receptor sequence

>6mtdj (length=86) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

TKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSA
KAKRRNTTGTGRMRHLKIVYRRFRHGFREGTTPKPK

3D structure

PDB

6mtd Structures of translationally inactive mammalian ribosomes.

Chain

Resolution

3.3 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	j	T2 K3 G4 T5 S6 S7 F8 G9 K10 R11 R12 N13 K14 T15 H16 K25 H28 Q30 G35 K36 K42 R43 K44 R45 K46 Y47 N48 W49 S50 K52 A53 R55 R56 T59 Y71 R75 E80 G81	T1 K2 G3 T4 S5 S6 F7 G8 K9 R10 R11 N12 K13 T14 H15 K24 H27 Q29 G34 K35 K41 R42 K43 R44 K45 Y46 N47 W48 S49 K51 A52 R54 R55 T58 Y70 R74 E79 G80
BS02	rna	j	R20 R21 G23 Y39 K42 T59 T61 G62 R63 M64 R65 H66 L67 K68 Y71 R72 R73 F74 H76 R79 E80 G81 T82 P84 P86 K87	R19 R20 G22 Y38 K41 T58 T60 G61 R62 M63 R64 H65 L66 K67 Y70 R71 R72 F73 H75 R78 E79 G80 T81 P83 P85 K86
BS03	ZN	j	C19 C34	C18 C33

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005840	ribosome

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component

External links

PDB	RCSB:6mtd, PDBe:6mtd, PDBj:6mtd
PDBsum	6mtd
PubMed	30355441
UniProt	U3KPD5\|RL37_RABIT Large ribosomal subunit protein eL37 (Gene Name=RPL37)

[Back to BioLiP]