Structure of PDB 8ipa Chain ia

Receptor sequence
>8ipaia (length=213) Species: 4565 (Triticum aestivum) [Search protein sequence]
QISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRAT
RTQNVLGEKGRRIRELTSVVQKRFNFLENGVELYAEKVVNRGLCAIAQAE
SLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFK
DGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPTTP
LPDLVTIHPPKEE
3D structure
PDB8ipa Boric acid intercepts 80S ribosome migration from AUG-stop by stabilizing eRF1.
Chainia
Resolution3.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna ia Q4 I5 S6 K7 K8 K9 S139 K141 R143 Q145 R146 A147 K151 Y156 M157 S159 S160 G161 Q162 H174 L176 Q179 V181 G183 P205 Q1 I2 S3 K4 K5 K6 S136 K138 R140 Q142 R143 A144 K148 Y153 M154 S156 S157 G158 Q159 H171 L173 Q176 V178 G180 P202
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022626 cytosolic ribosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8ipa, PDBe:8ipa, PDBj:8ipa
PDBsum8ipa
PubMed38267667
UniProtQ8L804

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