Structure of PDB 8uk3 Chain i

Receptor sequence
>8uk3i (length=272) Species: 444185 (Simian rotavirus A strain RRV) [Search protein sequence]
INLPITGSMDTAYANSTQEETFLTSTLCLYYPTEAATEINDNSWKDTLSQ
LFLTKGWPTGSVYFKEYTDIASFSVDPQLYCDYNVVLMKYDATLQLDMSE
LADLILNEWLCNPMDITLYYYQQTDEANKWISMGSSCTIKVCPLNTQTLG
IGCLTTDTATFEEVATAEKLVITDVVDGVNHKLDVTTATCTIRNCKKLGP
RENVAVIQVGGSDVLDITADPTTAPQTERMMRINWKKWWQVFYTVVDYVN
QIIQAMSKRSRSLNSAAFYYRI
3D structure
PDB8uk3 The rotavirus VP5*/VP8* conformational transition permeabilizes membranes to Ca2+
Chaini
Resolution8.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA i Q177 D228 D231 Q123 D174 D177
BS02 CA i G206 C207 T214 E216 G152 C153 T160 E162
BS03 CA i D151 E154 E222 L224 D97 E100 E168 L170
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:8uk3, PDBe:8uk3, PDBj:8uk3
PDBsum8uk3
PubMed38574119
UniProtP12476|VP7_ROTRH Outer capsid glycoprotein VP7

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