Structure of PDB 8s8i Chain i

Receptor sequence
>8s8ii (length=95) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
KRELIYKEEGQEYAQITKMLGNGRVEASCFDGNKRMAHIRGKLRKKVWMG
QGDIILVSLRDFQDDQCDVVHKYNLDEARTLKNQGELPENAKINE
3D structure
PDB8s8i Structural basis of AUC codon discrimination during translation initiation in yeast.
Chaini
Resolution4.3 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna i M41 L42 G43 N44 R46 R62 G63 K64 R66 K67 K68 V69 W70 M71 M19 L20 G21 N22 R24 R40 G41 K42 R44 K45 K46 V47 W48 M49
BS02 rna i K67 K68 K45 K46
BS03 MG i R62 G63 R40 G41
External links
PDB RCSB:8s8i, PDBe:8s8i, PDBj:8s8i
PDBsum8s8i
PubMed39193907
UniProtP38912|IF1A_YEAST Eukaryotic translation initiation factor 1A (Gene Name=TIF11)

[Back to BioLiP]