Structure of PDB 6em3 Chain i

Receptor sequence
>6em3i (length=74) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
SYKKGAASNRTKFVRSLVREIAGLSPYERRLIDLIRNSGEKRARKVAKKR
LGSFTRAKAKVEEMNNIIAASRRH
3D structure
PDB6em3 Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.
Chaini
Resolution3.2 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 rna i G31 A32 A33 R76 G78 G5 A6 A7 R50 G52
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:6em3, PDBe:6em3, PDBj:6em3
PDBsum6em3
PubMed29245012
UniProtO14455|RL36B_YEAST Large ribosomal subunit protein eL36B (Gene Name=RPL36B)

[Back to BioLiP]