Structure of PDB 3jam Chain i

Receptor sequence
>3jami (length=96) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
PKRELIYKEEGQEYAQITKMLGNGRVEASCFDGNKRMAHIRGKLRKKVWM
GQGDIILVSLRDFQDDQCDVVHKYNLDEARTLKNQGELPENAKINE
3D structure
PDB3jam Conformational Differences between Open and Closed States of the Eukaryotic Translation Initiation Complex.
Chaini
Resolution3.46 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna i L42 G43 N44 M58 I61 R62 G63 K64 L65 R66 W70 M71 L21 G22 N23 M37 I40 R41 G42 K43 L44 R45 W49 M50
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003725 double-stranded RNA binding
GO:0003743 translation initiation factor activity
GO:0005515 protein binding
GO:0019901 protein kinase binding
GO:0031369 translation initiation factor binding
GO:0043024 ribosomal small subunit binding
Biological Process
GO:0001677 formation of translation initiation ternary complex
GO:0001731 formation of translation preinitiation complex
GO:0001732 formation of cytoplasmic translation initiation complex
GO:0002188 translation reinitiation
GO:0006412 translation
GO:0006413 translational initiation
Cellular Component
GO:0005737 cytoplasm
GO:0010494 cytoplasmic stress granule
GO:0016282 eukaryotic 43S preinitiation complex
GO:0033290 eukaryotic 48S preinitiation complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:3jam, PDBe:3jam, PDBj:3jam
PDBsum3jam
PubMed26212456
UniProtP38912|IF1A_YEAST Eukaryotic translation initiation factor 1A (Gene Name=TIF11)

[Back to BioLiP]