Structure of PDB 3j80 Chain i

Receptor sequence
>3j80i (length=96) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
PKRELIYKEEGQEYAQITKMLGNGRVEASCFDGNKRMAHIRGKLRKKVWM
GQGDIILVSLRDFQDDQCDVVHKYNLDEARTLKNQGELPENAKINE
3D structure
PDB3j80 Structural changes enable start codon recognition by the eukaryotic translation initiation complex.
Chaini
Resolution3.75 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna i M41 L42 G43 N44 M58 I61 R62 G63 K64 R66 V69 W70 M71 M20 L21 G22 N23 M37 I40 R41 G42 K43 R45 V48 W49 M50
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003725 double-stranded RNA binding
GO:0003743 translation initiation factor activity
GO:0005515 protein binding
GO:0019901 protein kinase binding
GO:0031369 translation initiation factor binding
GO:0043024 ribosomal small subunit binding
Biological Process
GO:0001677 formation of translation initiation ternary complex
GO:0001731 formation of translation preinitiation complex
GO:0001732 formation of cytoplasmic translation initiation complex
GO:0002188 translation reinitiation
GO:0006412 translation
GO:0006413 translational initiation
Cellular Component
GO:0005737 cytoplasm
GO:0010494 cytoplasmic stress granule
GO:0016282 eukaryotic 43S preinitiation complex
GO:0033290 eukaryotic 48S preinitiation complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:3j80, PDBe:3j80, PDBj:3j80
PDBsum3j80
PubMed25417110
UniProtP38912|IF1A_YEAST Eukaryotic translation initiation factor 1A (Gene Name=TIF11)

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