Structure of PDB 3j7y Chain i

Receptor sequence

>3j7yi (length=96) Species: 9606 (Homo sapiens)

IGIRLTLPPPKVVDRWNEKRAMFGVYDNIGILGNFEKHPKELIRGPIWLR
GWKGNELQRCIRKRKMVGSRMFADDLHNLNKRIRYLYKHFNRHGKF

3D structure

• PDB: 3j7y Structure of the large ribosomal subunit from human mitochondria.
• Chain: i
• Resolution: 3.4 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	i	I32 R35 L36 R46 R51 G61 F66 H69 P70 R75 P77 W79 N86 E87 R93 K96 M97 H108 K112 R113 R115 Y116 Y118 K119 H120 F121 R123 H124 G125 K126 F127	I1 R4 L5 R15 R20 G30 F35 H38 P39 R44 P46 W48 N55 E56 R62 K65 M66 H77 K81 R82 R84 Y85 Y87 K88 H89 F90 R92 H93 G94 K95 F96

Gene Ontology

Molecular Function

• GO:0003735 structural constituent of ribosome
• GO:0005515 protein binding

Biological Process

• GO:0006412 translation
• GO:0032543 mitochondrial translation

Cellular Component

• GO:0005739 mitochondrion
• GO:0005743 mitochondrial inner membrane
• GO:0005761 mitochondrial ribosome
• GO:0005762 mitochondrial large ribosomal subunit
• GO:0005840 ribosome
• GO:1990904 ribonucleoprotein complex

External links

• PDB: RCSB:3j7y, PDBe:3j7y, PDBj:3j7y
• PDBsum: 3j7y
• PubMed: 25278503
• UniProt: Q4U2R6|RM51_HUMAN Large ribosomal subunit protein mL51 (Gene Name=MRPL51)