Structure of PDB 8p6i Chain h

Receptor sequence

>8p6ih (length=208) Species: 9606 (Homo sapiens) [Search protein sequence]

QVQLQQSGAELVKPGASVKLSCKASGYTFTNYYMYWVLQRPGQGLEWIGE
INPSNGGTTFNEKFKNKATLTVDKSSSTAYMQLNSLTSEDSAVYYCTRSR
YGNYVNYGMDYWGQGTSVTVSSASTTPPSVYPLASMVTLGCLVKGYFPEP
VTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSTVTCNVAHPASSTK
VDKKIVPR

3D structure

PDB

8p6i Reverse-engineering the anti-MUC1 antibody 139H2 by mass spectrometry-based de novo sequencing.

Chain

Resolution

2.5 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	h	T30 N31 Y32 Y33 E50 S54 T59 Y101 Y104	T30 N31 Y32 Y33 E50 S54 T59 Y101 Y104

External links

PDB	RCSB:8p6i, PDBe:8p6i, PDBj:8p6i
PDBsum	8p6i
PubMed	38508723

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