Structure of PDB 8olc Chain h

Receptor sequence

>8olch (length=275) Species: 10912 (Rotavirus) [Search protein sequence]

NYGINLPITGSMDTAYANSTQEETFLTSTLCLYYPTEAATEINDNSWKDT
LSQLFLTKGWPTGSVYFKEYTNIASFSVDPQLYCDYNVVLMKYDATLQLD
MSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGSSCTIKVCPLNTQ
TLGIGCLTTDATTFEEVATAEKLVITDVVDGVNHKLDVTTATCTIRNCKK
LGPRENVAVIQVGGSDILDITADPTTAPQTERMMRINWKKWWQVFYTVVD
YVDQIIQVMSKRSRSLNSAAFYYRV

3D structure

PDB

8olc Structural basis of rotavirus spike proteolytic activation

Chain

Resolution

3.48 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	CA	h	Q177 D228 V229 D231	Q126 D177 V178 D180
BS02	CA	h	G206 T214 E216	G155 T163 E165

External links

PDB	RCSB:8olc, PDBe:8olc, PDBj:8olc
PDBsum	8olc
PubMed
UniProt	A0A060IEQ1

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