Structure of PDB 6hcm Chain g1

Receptor sequence
>6hcmg1 (length=68) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]
KSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFM
ASHFDRHYCGKCCLTYCF
3D structure
PDB6hcm ZNF598 Is a Quality Control Sensor of Collided Ribosomes.
Chaing1
Resolution6.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna g1 Y85 T87 K89 K90 H93 R95 L100 R118 V130 F131 A133 S134 H135 R138 Y140 G142 K143 C145 Y3 T5 K7 K8 H11 R13 L18 R36 V48 F49 A51 S52 H53 R56 Y58 G60 K61 C63
BS02 ZN g1 C121 C141 C39 C59
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0031386 protein tag activity
GO:0031625 ubiquitin protein ligase binding
GO:0046872 metal ion binding
Biological Process
GO:0006412 translation
GO:0016567 protein ubiquitination
GO:0019941 modification-dependent protein catabolic process
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022626 cytosolic ribosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Cellular Component
External links
PDB RCSB:6hcm, PDBe:6hcm, PDBj:6hcm
PDBsum6hcm
PubMed30293783
UniProtG1SK22|RS27A_RABIT Ubiquitin-ribosomal protein eS31 fusion protein (Gene Name=RPS27A)

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