Structure of PDB 8ir1 Chain g

Receptor sequence
>8ir1g (length=112) Species: 9606 (Homo sapiens) [Search protein sequence]
TFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNN
TLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDY
DALDVANKIGII
3D structure
PDB8ir1 Visualizing the nucleoplasmic maturation of human pre-60S ribosomal particles.
Chaing
Resolution3.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna g R48 R53 R56 Q57 P58 K59 Y60 R62 T83 K89 N93 N105 K106 H107 N125 T126 I128 P130 K134 Y137 R4 R9 R12 Q13 P14 K15 Y16 R18 T39 K45 N49 N61 K62 H63 N81 T82 I84 P86 K90 Y93
BS02 rna g P49 R56 P66 R67 R68 N69 K70 Q108 P5 R12 P22 R23 R24 N25 K26 Q64
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
GO:0045296 cadherin binding
GO:1904841 TORC2 complex binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:0022626 cytosolic ribosome
GO:0070062 extracellular exosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8ir1, PDBe:8ir1, PDBj:8ir1
PDBsum8ir1
PubMed37491604
UniProtP62750|RL23A_HUMAN Large ribosomal subunit protein uL23 (Gene Name=RPL23A)

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