Structure of PDB 7otc Chain g

Receptor sequence
>7otcg (length=156) Species: 469008 (Escherichia coli BL21(DE3)) [Search protein sequence]
PRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVYSALETLA
QRSGKSELEAFEVALENVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAM
RWIVEAARKRGDKSMALRLANELSDAAENKGTAVKKREDVHRMAEANKAF
AHYRWL
3D structure
PDB7otc The cyclic octapeptide antibiotic argyrin B inhibits translation by trapping EF-G on the ribosome during translocation.
Chaing
Resolution2.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna g P2 R3 R4 I7 R10 K25 N28 M31 D33 G34 K35 K36 S37 T38 R92 R95 R102 R109 K114 M116 P1 R2 R3 I6 R9 K24 N27 M30 D32 G33 K34 K35 S36 T37 R91 R94 R101 R108 K113 M115
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003729 mRNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:7otc, PDBe:7otc, PDBj:7otc
PDBsum7otc
PubMed35500116
UniProtA0A140N6W8

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