Structure of PDB 7fj3 Chain g

Receptor sequence
>7fj3g (length=1310) Species: 10345 (Suid alphaherpesvirus 1) [Search protein sequence]
RPAILPSGQILSNIEVHSHRALFDIFKRFRSDDNNLYGAEFDALLGTYCS
TLSLVRFLELGLSVACVCTKFPELSYVAEGTIQFEVQQPMIARDGPHPAD
QPVHNYMIKRLDRRSLNAAFSIAVEALGLISGENLDGTHISSAMRLRAIQ
QLARNVQAVLDSFERGTADQMLRVLMEKAPPLSLLAPFTLYEGRLADRVA
CAALVSELKRRVRDDTFFLTKHERNKDAVLDRLSDLVNCTAPSVAVARMT
HADTQGRPVDGVLVTTAGVRQRLLHHVLTLADTHADVPVTYGEMVIANTN
LVTALVMGKAVSNMDDVARYLLGGGSARVRADLVVVGDRLVFLEALEKRV
YQATQVPYPLVGNLDVTFVMPLGVFKPAADRYARHAGSFAPTPGLPDPRT
HPPRAVHFFNKDGVPCHVTFEHAMGTLCHPSFLDVDATLAALRQEPAEVQ
CAFGAYVADARPDALVGLMQRFLEEWPGMMPVRPRWAAPAAADQLLAPGN
ADLRLELHPAFDFFVAPEVDVPGPFAVPQVMGQVRAMPRIINGNIPLALC
PVDFRDARGFELSVDRHRLAPATVAAVRGAFRDANYPMVFYIIEAVIHGS
ERTFCALARLVAQCIQSYWRNTHNAAFVNNFYMVMYINTYLGNGELPEDC
AAVYKDLLEHVHALRRLIGEFTLPGDPLGNQPQEELNHALADATLLPPLI
WDCDPILYRDGLAERLPELRVNGAHFQHILWVEMAQVNFRNVGGGLVHNR
PVRNENQPLHPHHDAEWSVLSKIYYYAVVPAFSRGNCCTMGVRYDRVYQL
VQTMVVPETDEEVGTDDPRHPLHPRNLVPNSLNVLFHNACVAVDADAMLI
LQETVTNMAERTTPLLASVAPDAGMATVATRDMRTHDGSLHHGLLMMAYQ
PNDATLLEGAFFYPAPVNALFACADHLGAMRDVGAEVRAAAQHVPCVPHF
LGANYYATVRQPVAQHAAQSRADENTLSYALMAGYFKMSPVAFTHQLRRQ
LHPGFALTVVRQDRFATENVLFAEKASESYFMGQMQVARTESGGLHLQLT
QPRANVDLGVGFTAAYAAAALRAPVTDMGNLPQNLFATRGAPPMLDADAD
DYLRRTVNAGNRLAPVPVFGQMLPQVPAGLARGQQSVCEFIATPVSVDLA
YFRRACNPRGRAAGEVHGEEGLMFDHSHADPAHPHRATANPWASQRHSYA
DRLYNGQYNMSGPAYSPCFKFFTPAEAVAKSRGLARLIADTGAAASPTSN
GEYQFKRPVGAGELVEDPCALFQEAYPPLCASDSALLRTPLGAEEHFAQY
LIRDESPLKG
3D structure
PDB7fj3 Structures of pseudorabies virus capsids.
Chaing
Resolution4.53 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide g A125 V126 L129 E1053 A123 V124 L127 E1041
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Cellular Component
GO:0019028 viral capsid
GO:0039622 T=16 icosahedral viral capsid

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:7fj3, PDBe:7fj3, PDBj:7fj3
PDBsum7fj3
PubMed35318331
UniProtG3G8T2

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