Structure of PDB 5gae Chain g

Receptor sequence
>5gaeg (length=399) Species: 562 (Escherichia coli) [Search protein sequence]
GGLGELKRRLLFVIGALIVFRIGSFIPIPGIDAAVLAKLLEQQRGTIIEM
FNMFSGGALSRASIFALGIMPYISASIIIQLLTVVHPTLAEIKKEGESGR
RKISQYTRYGTLVLAIFQSIGIATGLPNFAFYFTAVVSLVTGTMFLMWLG
EQITERGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFLVLLLVAV
LVFAVTFFVVFVERGQRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVI
PAIFASSIILFPATIASWFGGWNWLTTISLYLQPGQPLYVLLYASAIIFF
CFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLVGA
LYITFICLIPEFMRDAMKVPFYFGGTSLLIVVVVIMDFMAQVQTLMMSS
3D structure
PDB5gae Structures of the E. coli translating ribosome with SRP and its receptor and with the translocon.
Chaing
Resolution3.33 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna g Q253 R255 R256 K347 F352 G355 R357 Q228 R230 R231 K319 F324 G327 R329
BS02 peptide g W173 R181 W148 R156
Gene Ontology
Molecular Function
GO:0005048 signal sequence binding
GO:0005515 protein binding
GO:0008320 protein transmembrane transporter activity
Biological Process
GO:0006605 protein targeting
GO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation
GO:0006886 intracellular protein transport
GO:0015031 protein transport
GO:0032978 protein insertion into membrane from inner side
GO:0043952 protein transport by the Sec complex
GO:0065002 intracellular protein transmembrane transport
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0031522 cell envelope Sec protein transport complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5gae, PDBe:5gae, PDBj:5gae
PDBsum5gae
PubMed26804923
UniProtP0AGA2|SECY_ECOLI Protein translocase subunit SecY (Gene Name=secY)

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