Structure of PDB 8wmv Chain f

Receptor sequence

>8wmvf (length=174) Species: 52970 (Rhodomonas salina)

AMSESVPFLKKPEALDSSMAGYAGFDPLGLSSIADIKFLQESEIKHCRIA
MLAAAGSIAQDIFTFPGVSKVVGTAKMTGVHDVLVKQGAMGQILLWTSFL
EVFGTIALLETLDGKRAPGDFKFDPLGFSKNAETAKRYQLSEIKNGRLAM
LATGGMVHGYFITGKGPLELLTNF

3D structure

• PDB: 8wmv Growth phase-dependent reorganization of cryptophyte photosystem I antennae.
• Chain: f
• Resolution: 2.94 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	CLA	f	F135 F139	F99 F103
BS02	CLA	f	E40 S41 V42 P43 F44 F61	E4 S5 V6 P7 F8 F25
BS03	CLA	f	L51 A59 F61 L66 L75 Q76 E79 R183 M186	L15 A23 F25 L30 L39 Q40 E43 R147 M150
BS04	CLA	f	L88 G92 Q96 F101 V104 V116 L120 M126	L52 G56 Q60 F65 V68 V80 L84 M90
BS05	CLA	f	F101 P102 G103 V104	F65 P66 G67 V68
BS06	CLA	f	Q123 G124 A125 Q128 I129 W132	Q87 G88 A89 Q92 I93 W96
BS07	CLA	f	H117 V121 M126 G127 I129	H81 V85 M90 G91 I93
BS08	CLA	f	F74 S78 K81 H82 I85 L130 S134 E137 T141 L144	F38 S42 K45 H46 I49 L94 S98 E101 T105 L108
BS09	CLA	f	R84 M87 D156 F157 F159 D160 F164 S165 Y174 Q175 E178	R48 M51 D120 F121 F123 D124 F128 S129 Y138 Q139 E142
BS10	CLA	f	R173 S177 K180 N181 L184	R137 S141 K144 N145 L148
BS11	KC2	f	R173 Y174 N181 L184	R137 Y138 N145 L148
BS12	CLA	f	L187 A188 G191 H194 I198	L151 A152 G155 H158 I162
BS13	CLA	f	H194 F197	H158 F161
BS14	II0	f	M87 F159 D160 P161 F164 L184 A188 G191 M192	M51 F123 D124 P125 F128 L148 A152 G155 M156
BS15	II0	f	F61 D62 P63 L64 A89 Q96 M113 M186	F25 D26 P27 L28 A53 Q60 M77 M150
BS16	II0	f	K180 R183 L184 L187	K144 R147 L148 L151
BS17	IHT	f	T114 H117 D118 G190 V193	T78 H81 D82 G154 V157
BS18	II0	f	R84 I85 I129 T133	R48 I49 I93 T97

External links

• PDB: RCSB:8wmv, PDBe:8wmv, PDBj:8wmv
• PDBsum: 8wmv
• PubMed: 38734819