Structure of PDB 6zoj Chain f

Receptor sequence
>6zojf (length=72) Species: 9606 (Homo sapiens) [Search protein sequence]
KKRKKKSCTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECG
AGVFMASHFDRHYCGKCCLTYC
3D structure
PDB6zoj SARS-CoV-2 Nsp1 binds the ribosomal mRNA channel to inhibit translation.
Chainf
Resolution2.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna f K78 R80 T86 T87 P88 N91 K92 H93 R95 K99 L100 Y105 R118 F131 M132 A133 H135 R138 Y140 G142 K143 C145 T147 K1 R3 T9 T10 P11 N14 K15 H16 R18 K22 L23 Y28 R41 F54 M55 A56 H58 R61 Y63 G65 K66 C68 T70
BS02 ZN f C121 C126 C141 C144 C44 C49 C64 C67
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6zoj, PDBe:6zoj, PDBj:6zoj
PDBsum6zoj
PubMed32908316
UniProtP62979|RS27A_HUMAN Ubiquitin-ribosomal protein eS31 fusion protein (Gene Name=RPS27A)

[Back to BioLiP]