Structure of PDB 6wxe Chain f

Receptor sequence
>6wxef (length=265) Species: 444185 (Simian rotavirus A strain RRV) [Search protein sequence]
QNYGINLPITGSMDTAYANSTQEETFLTSTLCLYYPTEAATEINDNSWKD
TLSQLFLTKGWPTGSVYFKEYTDIASFSVDPQLYCDYNVVLMKYDATLQL
DMSELADLILNEWLCNPMDITLYYYQQTDEANKWISMGSSCTIKVCPLNT
QTLGIGCLTTDTATFEEVATAEKLVITDVVDGVNHKLDVTTATCTIRNCK
KLGPRENVAVIQVGGSDVLDITADPTTAPQTERMMRINWKKWWQVFYTVV
DYVNQIIQAMSKRSR
3D structure
PDB6wxe Functional refolding of the penetration protein on a non-enveloped virus.
Chainf
Resolution3.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 CA f Q177 E180 D228 D231 Q127 E130 D178 D181
BS02 CA f G206 T214 E216 G156 T164 E166
BS03 CA f D151 E154 E222 L224 D101 E104 E172 L174
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:6wxe, PDBe:6wxe, PDBj:6wxe
PDBsum6wxe
PubMed33442061
UniProtP12476|VP7_ROTRH Outer capsid glycoprotein VP7

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