Structure of PDB 6o7k Chain f

Receptor sequence
>6o7kf (length=509) Species: 562 (Escherichia coli) [Search protein sequence]
DTGAAAEPRAPVVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAY
HVETENGMITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIE
AIQHAKAAQVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFV
HVSAKAGTGIDELLDAILLQAEVLELKAVRKGMASGAVIESFLDKGRGPV
ATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSIPVEILGL
SGVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKLENMFANM
TEGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITET
DATLAAASNAILVGFNVRADASARKVIEAESLDLRYYSVIYNLIDEVKAA
MSGMLSPELKQQIIGLAEVRDVFKSPKFGAIAGCMVTEGVVKRHNPIRVL
RDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVKNYNDVRTGDVIEVFE
IIEIQRTIA
3D structure
PDB6o7k Late steps in bacterial translation initiation visualized using time-resolved cryo-EM.
Chainf
Resolution4.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna f K576 G577 G579 K593 R605 R607 K648 R651 T731 K195 G196 G198 K212 R224 R226 K267 R270 T350
BS02 rna f K805 S806 P807 K808 I812 A813 R846 F848 G862 I863 K424 S425 P426 K427 I431 A432 R465 F467 G481 I482
Gene Ontology
Molecular Function
GO:0003743 translation initiation factor activity
GO:0003924 GTPase activity
GO:0005525 GTP binding
Biological Process
GO:0006413 translational initiation

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:6o7k, PDBe:6o7k, PDBj:6o7k
PDBsum6o7k
PubMed31108498
UniProtP0A705|IF2_ECOLI Translation initiation factor IF-2 (Gene Name=infB)

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