Structure of PDB 5y6p Chain ez

Receptor sequence

>5y6pez (length=276) Species: 35689 (Griffithsia pacifica) [Search protein sequence]

VVDPFQRKFQSIGKIGIDYSRPKKLATYKRVGYSVGLDFPNAVSMAGHYS
LTDCTRAGGAAKILMKYDEYCAKGMLQVYKRSAVSTGVYTTKCTEATQPG
VAYDVRVFNRTAAFRQAQKPVNVRLGEQYAARKACVTLAHNCSREEAQFK
NMPMSCATFLAGKMEAMGTCYRTVRPSSKAEDYMAGSVRMQVYQKGNASG
VYPVGGCEDGHAKGDADLRRVIALASEYRAAQQGAAAVTGAQYASSKMAI
QLYGHSCNHEEGQFCDYPAVAAAMCR

3D structure

PDB

5y6p Structure of phycobilisome from the red alga Griffithsia pacifica

Chain

Resolution

3.5 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	PEB	ez	I56 Y60 L66 Y69	I15 Y19 L25 Y28
BS02	PEB	ez	N163 G167 Y170	N122 G126 Y129
BS03	PEB	ez	R151 F155 R156	R110 F114 R115
BS04	PEB	ez	L265 Y269	L224 Y228
BS05	PEB	ez	Y224 S228	Y183 S187
BS06	PEB	ez	P81 A87 G88 Y90 S91 A158	P40 A46 G47 Y49 S50 A117
BS07	PEB	ez	C112 M116 C183 E186 Q189 M193 F200	C71 M75 C142 E145 Q148 M152 F159
BS08	PEB	ez	M225 V229 Q232 C298 E301 Q304	M184 V188 Q191 C257 E260 Q263
BS09	PVN	ez	K121 E136 M205 E206 C211 R213 R260	K80 E95 M164 E165 C170 R172 R219
BS10	PUB	ez	Y234 Y243 C248 D250 A257 R261 L265	Y193 Y202 C207 D209 A216 R220 L224
BS11	PUB	ez	N82 K121 Y130 C134 E136 A143 Y144 R147	N41 K80 Y89 C93 E95 A102 Y103 R106

External links

PDB	RCSB:5y6p, PDBe:5y6p, PDBj:5y6p
PDBsum	5y6p
PubMed	29045394

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