Structure of PDB 5y6p Chain e9

Receptor sequence

>5y6pe9 (length=239) Species: 35689 (Griffithsia pacifica) [Search protein sequence]

VLRSPVPSGAATVYGYVGRGNISVILAKADEYMAKSVRKQYLAKSNPYGT
FGVQCTEGSVKFAADFSRIRALNAEFRAKLGSASKKTFDMYENRKNAISN
SHGCHHEETQFVGYKGVSSMYNVSKSEASGSCSRYASPETVVEAAMLRFM
DIQVKMAANPTGVYNISCNEGAARGQAEDVRVAALNAAFRQGQKSLGKLL
DEKYQQKKQGYSFAHGCNYEEGLINKYPALGAAFRSKSY

3D structure

PDB

5y6p Structure of phycobilisome from the red alga Griffithsia pacifica

Chain

Resolution

3.5 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	PEB	e9	L116 F120	L72 F76
BS02	PEB	e9	Y76 M77 S80 H150	Y32 M33 S36 H106
BS03	PEB	e9	F233 Q237	F189 Q193
BS04	PEB	e9	L244 Y248	L200 Y204
BS05	PEB	e9	F193 Q197	F149 Q153
BS06	PEB	e9	M77 V81 Q84 Y85 C148 E151 Q154 Y165	M33 V37 Q40 Y41 C104 E107 Q110 Y121
BS07	PEB	e9	M194 Q197 C261 E264	M150 Q153 C217 E220
BS08	PVN	e9	L86 Q98 E101 S111 E171 C176 R178 Y179	L42 Q54 E57 S67 E127 C132 R134 Y135
BS09	PUB	e9	Y208 C212 E214 R225	Y164 C168 E170 R181
BS10	PUB	e9	L86 F95 E101 A108 D109 R112 L116	L42 F51 E57 A64 D65 R68 L72

External links

PDB	RCSB:5y6p, PDBe:5y6p, PDBj:5y6p
PDBsum	5y6p
PubMed	29045394

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