Structure of PDB 8q54 Chain e

Receptor sequence
>8q54e (length=294) Species: 145263 (Methanothermobacter marburgensis) [Search protein sequence]
MDPMITGLGVVALMGAAATIAGAAEDLESDVGSQSNPNSQVQLAPQMGHL
HRIINKAVSGEPVAYGTWCGIAGSVAFVLMNSMQLPVIMAIAIGAVIAAM
VHTTYAVTSHMGRIVSQSQFNQPLFMDMLVQHLGPIAGHGFIVTFCTVGL
SYLMTLPIPGFAHPFPLPLLAVLWGITIGAIGSSTGDVHYGAEREYQQYP
FGGGIPVAIHGDITTKAELGARNSMDVVHFCAKYGGPLTGFAFGAIVFLS
FWNTIVFGITGGIISGLIIVLLLIILNNRLEVFARNRYGPYKEE
3D structure
PDB8q54 Cryo-EM structure of the methanogenic Na+ translocating N5-methyl-H4MPT:CoM methyltransferase complex
Chaine
Resolution2.39 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 JCV e M100 T104 M126 M100 T104 M126
BS02 COM e S35 N38 S39 A57 S59 R113 S35 N38 S39 A57 S59 R113
BS03 JCV e C146 Y152 L153 H229 K233 C146 Y152 L153 H229 K233
BS04 JCV e F257 S265 I269 L276 F283 R287 F257 S265 I269 L276 F283 R287
BS05 JCV e M83 Q84 Q131 L133 M83 Q84 Q131 L133
External links
PDB RCSB:8q54, PDBe:8q54, PDBj:8q54
PDBsum8q54
PubMed
UniProtP80186|MTRE_METTM Tetrahydromethanopterin S-methyltransferase subunit E (Gene Name=mtrE)

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