Structure of PDB 8olc Chain e

Receptor sequence

>8olce (length=272) Species: 10912 (Rotavirus) [Search protein sequence]

INLPITGSMDTAYANSTQEETFLTSTLCLYYPTEAATEINDNSWKDTLSQ
LFLTKGWPTGSVYFKEYTNIASFSVDPQLYCDYNVVLMKYDATLQLDMSE
LADLILNEWLCNPMDITLYYYQQTDEANKWISMGSSCTIKVCPLNTQTLG
IGCLTTDATTFEEVATAEKLVITDVVDGVNHKLDVTTATCTIRNCKKLGP
RENVAVIQVGGSDILDITADPTTAPQTERMMRINWKKWWQVFYTVVDYVD
QIIQVMSKRSRSLNSAAFYYRV

3D structure

PDB

8olc Structural basis of rotavirus spike proteolytic activation

Chain

Resolution

3.48 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	CA	e	Q177 D228 V229 D231	Q123 D174 V175 D177
BS02	CA	e	G206 T214 E216	G152 T160 E162

External links

PDB	RCSB:8olc, PDBe:8olc, PDBj:8olc
PDBsum	8olc
PubMed
UniProt	A0A060IEQ1

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