Structure of PDB 8olb Chain e

Receptor sequence

>8olbe (length=270) Species: 10912 (Rotavirus) [Search protein sequence]

LPITGSMDTAYANSTQEETFLTSTLCLYYPTEAATEINDNSWKDTLSQLF
LTKGWPTGSVYFKEYTNIASFSVDPQLYCDYNVVLMKYDATLQLDMSELA
DLILNEWLCNPMDITLYYYQQTDEANKWISMGSSCTIKVCPLNTQTLGIG
CLTTDATTFEEVATAEKLVITDVVDGVNHKLDVTTATCTIRNCKKLGPRE
NVAVIQVGGSDILDITADPTTAPQTERMMRINWKKWWQVFYTVVDYVDQI
IQVMSKRSRSLNSAAFYYRV

3D structure

PDB

8olb Structural basis of rotavirus spike proteolytic activation

Chain

Resolution

3.4 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	CA	e	D228 V229 D231	D172 V173 D175
BS02	CA	e	G206 T214 F215 E216	G150 T158 F159 E160

External links

PDB	RCSB:8olb, PDBe:8olb, PDBj:8olb
PDBsum	8olb
PubMed
UniProt	A0A060IEQ1

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