Structure of PDB 8bp8 Chain e

Receptor sequence
>8bp8e (length=397) Species: 28875 (Rotavirus A) [Search protein sequence]
MDVLYSLSKTLKDARDKIVEGTLYSNVSDLIQQFNQMIITMNGNEFQTGG
IGNLPIRNWNFNFGLLGTTLLNLDANYVETARNTIDYFVDFVDNVCMDEM
VRESQRNGIAPQSDSLRKLSAIKFKRINFDNSSEYIENWNLQNRRQRTGF
TFHKPNIFPYSASFTLNRSQPAHDNLMGTMWLNAGSEIQVAGFDYSCAIN
APANIQQFEHIVPLRRVLTTATITLLPDAERFSFPRVINSADGATTWFFN
PVILRPNNVEVEFLLNGQIINTYQARFGTIVARNFDTIRLSFQLMRPPNM
TPAVAVLFPNAQPFEHHATVGLTLRIESAVCESVLADASETLLANVTSVR
QEYAIPVGPVFPPGMNWTDLITNYSPSREDNLQRVFTVASIRSMLIK
3D structure
PDB8bp8 Characterization of the rotavirus assembly pathway in situ using cryoelectron tomography.
Chaine
Resolution2.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN e H153 K154 H153 K154
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
GO:0046789 host cell surface receptor binding
GO:0046872 metal ion binding
Biological Process
GO:0019064 fusion of virus membrane with host plasma membrane
GO:0044650 adhesion of symbiont to host cell
Cellular Component
GO:0019028 viral capsid
GO:0019031 viral envelope
GO:0039626 viral intermediate capsid

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8bp8, PDBe:8bp8, PDBj:8bp8
PDBsum8bp8
PubMed36996819
UniProtA2T3S6

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