Structure of PDB 6p4h Chain e

Receptor sequence
>6p4he (length=55) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]
GHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIG
FIKLD
3D structure
PDB6p4h The Israeli acute paralysis virus IRES captures host ribosomes by mimicking a ribosomal state with hybrid tRNAs.
Chaine
Resolution3.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna e G2 H3 L6 Y7 H10 P11 R12 K13 F14 G15 G17 R19 R22 C24 N26 H28 L30 I31 R32 K33 Y34 R40 Q41 R44 L55 D56 G1 H2 L5 Y6 H9 P10 R11 K12 F13 G14 G16 R18 R21 C23 N25 H27 L29 I30 R31 K32 Y33 R39 Q40 R43 L54 D55
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0008270 zinc ion binding
GO:0046872 metal ion binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005783 endoplasmic reticulum
GO:0005791 rough endoplasmic reticulum
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022626 cytosolic ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:6p4h, PDBe:6p4h, PDBj:6p4h
PDBsum6p4h
PubMed31609474
UniProtG1U7M4|RS29_RABIT Small ribosomal subunit protein uS14 (Gene Name=RPS29)

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