Structure of PDB 6i7o Chain e

Receptor sequence

>6i7oe (length=97) Species: 4932 (Saccharomyces cerevisiae)

PKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVR
DLSEASVYPEYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPP

3D structure

• PDB: 6i7o Collided ribosomes form a unique structural interface to induce Hel2-driven quality control pathways.
• Chain: e
• Resolution: 5.3 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	e	P2 K3 K4 R5 A6 N8 G9 R10 K12 K13 G14 R15 G16 H17 K19 K32 K37 R38 K70 V75 S76 I79 R82 V84 R87 R89 R92 R95 P97	P1 K2 K3 R4 A5 N7 G8 R9 K11 K12 G13 R14 G15 H16 K18 K31 K36 R37 K69 V74 S75 I78 R81 V83 R86 R88 R91 R94 P96
BS02	rna	e	R42 E46 H80	R41 E45 H79
BS03	ZN	e	C23 C74 C77	C22 C73 C76

Gene Ontology

Molecular Function

• GO:0003735 structural constituent of ribosome

Biological Process

• GO:0006412 translation

Cellular Component

• GO:0005840 ribosome

External links

• PDB: RCSB:6i7o, PDBe:6i7o, PDBj:6i7o
• PDBsum: 6i7o
• PubMed: 30609991
• UniProt: P39939|RS26B_YEAST Small ribosomal subunit protein eS26B (Gene Name=RPS26B)