Structure of PDB 5lzx Chain dd

Receptor sequence

>5lzxdd (length=55) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]

GHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIG
FIKLD

3D structure

PDB

5lzx Decoding Mammalian Ribosome-mRNA States by Translational GTPase Complexes.

Chain

Resolution

3.67 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	dd	G2 H3 L6 Y7 W8 H10 P11 R12 K13 F14 G15 Q16 G17 S18 R19 C24 N26 R27 H28 G29 L30 I31 R32 K33 Y34 N37 R40 Q41 R44 K54 D56	G1 H2 L5 Y6 W7 H9 P10 R11 K12 F13 G14 Q15 G16 S17 R18 C23 N25 R26 H27 G28 L29 I30 R31 K32 Y33 N36 R39 Q40 R43 K53 D55
BS02	ZN	dd	C21 C24 C39 C42	C20 C23 C38 C41

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome
GO:0008270	zinc ion binding
GO:0046872	metal ion binding

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005737	cytoplasm
GO:0005783	endoplasmic reticulum
GO:0005791	rough endoplasmic reticulum
GO:0005829	cytosol
GO:0005840	ribosome
GO:0022626	cytosolic ribosome
GO:0022627	cytosolic small ribosomal subunit
GO:1990904	ribonucleoprotein complex

External links

PDB	RCSB:5lzx, PDBe:5lzx, PDBj:5lzx
PDBsum	5lzx
PubMed	27863242
UniProt	G1U7M4\|RS29_RABIT Small ribosomal subunit protein uS14 (Gene Name=RPS29)