Structure of PDB 7y5e Chain dB

Receptor sequence
>7y5edB (length=177) Species: 35688 (Porphyridium purpureum) [Search protein sequence]
MLDAFSRVVVNSDAKAAYVGGSDLQALKSFIADGNKRLDAVNSIVSNASC
MVSDAVSGMICENPGLISPGGNCYTNRRMAACLRDGEIILRYVSYALLAG
DASVLEDRCLNGLKETYIALGVPTNSSIRAVSIMKAQAVAFITNTATERK
MSFAAGDCTSLASEVASYFDRVGAAIS
3D structure
PDB7y5e In situ structure of the red algal phycobilisome-PSII-PSI-LHC megacomplex.
ChaindB
Resolution3.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 PEB dB V10 R108 V10 R108
BS02 PEB dB R78 A81 C82 R84 D85 L120 V122 R78 A81 C82 R84 D85 L120 V122
BS03 PEB dB N35 K36 L38 D39 I142 F153 A154 A155 C158 N35 K36 L38 D39 I142 F153 A154 A155 C158
BS04 PEB dB C50 D54 G58 C61 I133 Q137 F141 T147 E148 C50 D54 G58 C61 I133 Q137 F141 T147 E148
Gene Ontology
Cellular Component
GO:0009507 chloroplast
GO:0009535 chloroplast thylakoid membrane
GO:0009579 thylakoid
GO:0016020 membrane
GO:0030089 phycobilisome

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Biological Process
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Cellular Component
External links
PDB RCSB:7y5e, PDBe:7y5e, PDBj:7y5e
PDBsum7y5e
PubMed36922595
UniProtP11393|PHEB_PORPP B-phycoerythrin beta chain (Gene Name=cpeB)

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