Structure of PDB 5dat Chain d7

Receptor sequence
>5datd7 (length=81) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
VLVQDLLHPTAASEARKHKLKTLVQGPRSYFLDVKCPGCLNITTVFSHAQ
TAVTCESCSTILCTPTGGKAKLSEGTSFRRK
3D structure
PDB5dat Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome
Chaind7
Resolution3.15 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna d7 R17 H19 K20 L21 K22 Q26 P28 S30 H49 Q51 T67 G68 K70 K72 R16 H18 K19 L20 K21 Q25 P27 S29 H48 Q50 T66 G67 K69 K71
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0008270 zinc ion binding
GO:0046872 metal ion binding
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:0044391 ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:5dat, PDBe:5dat, PDBj:5dat
PDBsum5dat
PubMed
UniProtP35997|RS27A_YEAST Small ribosomal subunit protein eS27A (Gene Name=RPS27A)

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