Structure of PDB 8qfd Chain d

Receptor sequence
>8qfdd (length=105) Species: 9606 (Homo sapiens) [Search protein sequence]
NEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTR
LNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNL
QTVNV
3D structure
PDB8qfd The UFM1 E3 ligase recognizes and releases 60S ribosomes from ER translocons
Chaind
Resolution2.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna d R23 T26 H30 K31 R32 H34 G35 F38 K39 R41 R44 K47 R50 I64 T66 N69 K70 W73 K75 I77 R78 N79 Y82 R83 N116 L117 Q118 R6 T9 H13 K14 R15 H17 G18 F21 K22 R24 R27 K30 R33 I47 T49 N52 K53 W56 K58 I60 R61 N62 Y65 R66 N99 L100 Q101
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0005925 focal adhesion
GO:0016020 membrane
GO:0022625 cytosolic large ribosomal subunit
GO:0022626 cytosolic ribosome
GO:0070062 extracellular exosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8qfd, PDBe:8qfd, PDBj:8qfd
PDBsum8qfd
PubMed38383789
UniProtP62899|RL31_HUMAN Large ribosomal subunit protein eL31 (Gene Name=RPL31)

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